Commits · a9fa4b58a1d152eccd4908d737191f6ea5f245c7 · gad-public / vihgo

08 Dec, 2020 1 commit
- Changing format · a9fa4b58
  Yannis Duffourd authored Dec 08, 2020
  
  a9fa4b58
24 Sep, 2020 2 commits
- Code reformating for clang complience · d066f640
  Yannis Duffourd authored Sep 24, 2020
  
  d066f640
- Adding control cs improvement · 37344ab2
  Yannis Duffourd authored Sep 24, 2020
  
  37344ab2
29 Jul, 2020 4 commits
- Adding support for undetermined AA from codon containing N · 0243b7fc
  Yannis Duffourd authored Jul 29, 2020
  
  0243b7fc
- Adding support for I/O optimisation with -std=gnu++0x flag enable for old compilers · a279d9db
  Yannis Duffourd authored Jul 29, 2020
  
  a279d9db
- Implementing new method to FET computing, not in used actually · 8f142c83
  Yannis Duffourd authored Jul 29, 2020
  
  8f142c83
- Adding support for deletion / insertion calling · 4f1e74c9
  Yannis Duffourd authored Jul 29, 2020
  
  4f1e74c9
10 Jul, 2020 7 commits
- deleting unversion file · d1f5ff56
  Yannis Duffourd authored Jul 10, 2020
  
  d1f5ff56
- implementing unit tests · 7affbdf0
  Yannis Duffourd authored Jul 10, 2020
  
  7affbdf0
- adding statistical tests (FET, CHI2), need a probable rewamp · 5abb3753
  Yannis Duffourd authored Jul 10, 2020
  
  5abb3753
- in run control is now an option · 552afefb
  Yannis Duffourd authored Jul 10, 2020
  
  552afefb
- release v0.3 : Adding features : read in run control optionnaly, cs generation,… · 4ca3fb2b
  Yannis Duffourd authored Jul 10, 2020
```
release v0.3 : Adding features : read in run control optionnaly, cs generation, variant calling by codon, new codon file format, annotation are now deactivated, backgroupnd noise is computed on sample itself avoiding issues if there is no control, hard & soft clipping management, bug correction regarding missing data in controls
```
  4ca3fb2b
- Adding targets for ccub, debug mode, unit tests · 920518c8
  Yannis Duffourd authored Jul 10, 2020
  
  920518c8
- release v0.3 : Adding features : read in run control optionnaly, cs generation,… · 08c0c724
  Yannis Duffourd authored Jul 10, 2020
```
release v0.3 : Adding features : read in run control optionnaly, cs generation, variant calling by codon, new codon file format, annotation are now deactivated, backgroupnd noise is computed on sample itself avoiding issues if there is no control, hard & soft clipping management, bug correction regarding missing data in controls
```
  08c0c724
23 Apr, 2020 3 commits
- implementation of reference, genes and annotations reading · 9a6ba918
  Yannis authored Apr 23, 2020
  
  9a6ba918
- implementation of reference, genes and annotations reading · 3de107cf
  Yannis authored Apr 23, 2020
  
  3de107cf
- implementation of reference, genes and annotations reading · d31f85e5
  Yannis authored Apr 23, 2020
  
  d31f85e5
17 Mar, 2020 4 commits
- adding test data · 82c20d8b
  Yannis Duffourd authored Mar 17, 2020
  
  82c20d8b
- Adding cpp version · b2c92990
  Yannis Duffourd authored Mar 17, 2020
  
  b2c92990
- Bug correction · abbbd9a5
  Yannis Duffourd authored Mar 17, 2020
  
  abbbd9a5
- New cpp folder · 6bc6ad9b
  Yannis Duffourd authored Mar 17, 2020
  
  6bc6ad9b
19 Mar, 2018 2 commits
- Test of the commit · 73501bd2
  Yannis Duffourd authored Mar 19, 2018
  
  73501bd2
- Initial commit of the repository · cd11dcf8
  YannisDuffourd authored Mar 19, 2018
  
  cd11dcf8