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v0.3 version 0.3
Vihgo v0.3 Vihgo can now work on any virus sequencing data. You need to provide a reference genome (fasta format), and a gff file for genome features identification.
- Cs generation
- Codon table generation
- Variation file generation
- Annotation has been "removed", need a third party tool
- GFF support for genome annotation (genes and prot)
- Can now perform the wariant calling with or without control sample
- Tested on VIH and SarsCov2, fully working
- Insertions / deletions are not yet detected (dev branch)
- Unit tests are in active implementation
- Source code
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