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gad-public
vihgo
Commits
a9fa4b58
Commit
a9fa4b58
authored
Dec 08, 2020
by
Yannis Duffourd
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integrase.tsv.csv
data/integrase.tsv.csv
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data/integrase.tsv.csv
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a9fa4b58
#integrase
Position ,Position ,AA,Nucléotides,,CONCLUSION
AA,nucléotides,SAUVAGE,,AA FINAL,
49,145,A,GCT,A,
49,145,A,GCC,A,WT
49,145,A,GCA,A,
49,145,A,GCG,A,
49,145,A,GGT,G,MUTE
49,145,A,GGC,G,MUTE
49,145,A,GGG,G,MUTE
49,145,A,GGA,G,MUTE
66,196,T,ACT,T,
66,196,T,ACC,T,
66,196,T,ACA,T,WT
66,196,T,ACG,T,
66,196,T,AAA,K,MUTE
66,196,T,AAG,K,MUTE
66,196,T,ATT,I,MUTE
66,196,T,ATC,I,MUTE
66,196,T,ATA,I,MUTE
66,196,T,GCT,A,MUTE
66,196,T,GCC,A,MUTE
66,196,T,GCA,A,MUTE
66,196,T,GCG,A,MUTE
74,220,L,TTG,L,
74,220,L,TTA,L,
74,220,L,CTT,L,
74,220,L,CTC,L,
74,220,L,CTG,L,WT
74,220,L,CTA,L,
74,220,L,ATT,I,MUTE
74,220,L,ATC,I,MUTE
74,220,L,ATA,I,MUTE
74,220,L,ATG,M,MUTE
92,274,E,GAA,E,WT
92,274,E,GAG,E,
92,274,E,CAA,Q,MUTE
92,274,E,CAG,Q,MUTE
92,274,E,GGA,G,MUTE
92,274,E,GGG,G,MUTE
92,274,E,GGT,G,MUTE
92,274,E,GGC,G,MUTE
97,289,T,ACT,T,
97,289,T,ACA,T,WT
97,289,T,ACG,T,
97,289,T,ACC,T,
97,289,T,GCA,A,MUTE
97,289,T,GCT,A,MUTE
97,289,T,GCG,A,MUTE
97,289,T,GCC,A,MUTE
118,352,G,GGT,G,
118,352,G,GGC,G,WT
118,352,G,GGA,G,
118,352,G,GGG,G,
118,352,G,CGT,R,MUTE
118,352,G,CGC,R,MUTE
118,352,G,CGA,R,MUTE
118,352,G,CGG,R,MUTE
118,352,G,AGA,R,MUTE
118,352,G,AGG,R,MUTE
121,361,F,TTT,F,
121,361,F,TTC,F,WT
121,361,F,TAT,Y,MUTE
121,361,F,TAC,Y,MUTE
138,412,E,GAA,E,WT
138,412,E,GAG,E,
138,412,E,AAA,K,MUTE
138,412,E,AAG,K,MUTE
138,412,E,GCT,A,MUTE
138,412,E,GCC,A,MUTE
138,412,E,GCA,A,MUTE
138,412,E,GCG,A,MUTE
138,412,E,ACT,T,MUTE
138,412,E,ACC,T,MUTE
138,412,E,ACA,T,MUTE
138,412,E,ACG,T,MUTE
140,418,G,GGT,G,
140,418,G,GGC,G,
140,418,G,GGA,G,WT
140,418,G,GGG,G,
140,418,G,GCT,A,MUTE
140,418,G,GCC,A,MUTE
140,418,G,GCA,A,MUTE
140,418,G,GCG,A,MUTE
140,418,G,TGT,C,MUTE
140,418,G,TGC,C,MUTE
140,418,G,TCT,S,MUTE
140,418,G,TCC,S,MUTE
140,418,G,TCA,S,MUTE
140,418,G,TCG,S,MUTE
140,418,G,AGT,S,MUTE
140,418,G,AGC,S,MUTE
143,427,Y,TAT,Y,
143,427,Y,TAC,Y,WT
143,427,Y,GCT,A,MUTE
143,427,Y,GCC,A,MUTE
143,427,Y,GCA,A,MUTE
143,427,Y,GCG,A,MUTE
143,427,Y,TGT,C,MUTE
143,427,Y,TGC,C,MUTE
143,427,Y,TCT,S,MUTE
143,427,Y,TCC,S,MUTE
143,427,Y,TCA,S,MUTE
143,427,Y,TCG,S,MUTE
143,427,Y,AGT,S,MUTE
143,427,Y,AGC,S,MUTE
143,427,Y,GGT,G,MUTE
143,427,Y,GGC,G,MUTE
143,427,Y,GGA,G,MUTE
143,427,Y,GGG,G,MUTE
143,427,Y,CAT,H,MUTE
143,427,Y,CAC,H,MUTE
143,427,Y,CGT,R,MUTE
143,427,Y,CGC,R,MUTE
143,427,Y,CGA,R,MUTE
143,427,Y,CGG,R,MUTE
143,427,Y,AGA,R,MUTE
143,427,Y,AGG,R,MUTE
145,433,P,CCT,P,
145,433,P,CCC,P,WT
145,433,P,CCA,P,
145,433,P,CCG,P,
145,433,P,TCC,S,MUTE
145,433,P,TCA,S,MUTE
145,433,P,TCG,S,MUTE
145,433,P,AGT,S,MUTE
145,433,P,AGC,S,MUTE
145,433,P,TCT,S,MUTE
147,439,S,TCT,S,
147,439,S,TCC,S,
147,439,S,TCA,S,
147,439,S,TCG,S,
147,439,S,AGT,S,WT
147,439,S,AGC,S,
147,439,S,GGT,G,MUTE
147,439,S,GGC,G,MUTE
147,439,S,GGA,G,MUTE
147,439,S,GGG,G,MUTE
148,442,Q,CAA,Q,WT
148,442,Q,CAG,Q,WT
148,442,Q,GAA,E,MUTE
148,442,Q,GAG,E,MUTE
148,442,Q,GGT,G,MUTE
148,442,Q,GGT,G,MUTE
148,442,Q,GGC,G,MUTE
148,442,Q,GGA,G,MUTE
148,442,Q,GGG,G,MUTE
148,442,Q,CAC,H,MUTE
148,442,Q,CAT,H,MUTE
148,442,Q,AAA,K,MUTE
148,442,Q,AAG,K,MUTE
148,442,Q,CGA,R,MUTE
148,442,Q,CGG,R,MUTE
148,442,Q,AGA,R,MUTE
148,442,Q,AGG,R,MUTE
151,451,V,GTT,V,
151,451,V,GTC,V,
151,451,V,GTA,V,WT
151,451,V,GTG,V,
151,451,V,TTG,L,MUTE
151,451,V,TTA,L,MUTE
151,451,V,CTT,L,MUTE
151,451,V,CTC,L,MUTE
151,451,V,CTG,L,MUTE
151,451,V,CTA,L,MUTE
153,457,S,TCT,S,WT
153,457,S,TCC,S,
153,457,S,TCA,S,
153,457,S,TCG,S,
153,457,S,AGT,S,
153,457,S,AGC,S,
153,457,S,TTT,F,MUTE
153,457,S,TTC,F,MUTE
153,457,S,TAT,Y,MUTE
153,457,S,TAC,Y,MUTE
155,463,N,AAT,N,WT
155,463,N,AAC,N,
155,463,N,CAT,H,MUTE
155,463,N,CAC,H,MUTE
155,463,N,TCC,S,MUTE
155,463,N,TCA,S,MUTE
155,463,N,TCG,S,MUTE
155,463,N,AGT,S,MUTE
155,463,N,AGC,S,MUTE
155,463,N,TCT,S,MUTE
155,463,N,ACT,T,MUTE
155,463,N,ACC,T,MUTE
155,463,N,ACA,T,MUTE
155,463,N,ACG,T,MUTE
157,469,E,GAA,E,WT
157,469,E,GAG,E,
157,469,E,CAA,Q,MUTE
157,469,E,CAG,Q,MUTE
230,688,S,TCT,S,
230,688,S,TCC,S,
230,688,S,TCA,S,
230,688,S,TCG,S,
230,688,S,AGT,S,
230,688,S,AGC,S,WT
230,688,S,GGT,G,MUTE
230,688,S,GGC,G,MUTE
230,688,S,GGA,G,MUTE
230,688,S,GGG,G,MUTE
230,688,S,CGA,R,MUTE
230,688,S,CGG,R,MUTE
230,688,S,AGA,R,MUTE
230,688,S,AGG,R,MUTE
263,787,R,AGG,R,
263,787,R,AGA,R,WT
263,787,R,AAA,K,MUTE
263,787,R,AAG,K,MUTE
#integrase
Position ,Position ,AA,Nucléotides,,CONCLUSION
AA,nucléotides,SAUVAGE,,AA FINAL,
92,274,E,GAA,E,WT
92,274,E,GGG,G,MUTE
92,274,E,GGT,G,MUTE
92,274,E,GGC,G,MUTE
97,289,T,ACA,T,WT
97,289,T,GCA,A,MUTE
97,289,T,GCT,A,MUTE
97,289,T,GCG,A,MUTE
97,289,T,GCC,A,MUTE
118,352,G,GGC,G,WT
118,352,G,CGT,R,MUTE
118,352,G,CGC,R,MUTE
118,352,G,CGA,R,MUTE
118,352,G,CGG,R,MUTE
118,352,G,AGA,R,MUTE
118,352,G,AGG,R,MUTE
121,361,F,TTC,F,WT
121,361,F,TAT,Y,MUTE
121,361,F,TAC,Y,MUTE
138,412,E,GAA,E,WT
138,412,E,AAA,K,MUTE
138,412,E,AAG,K,MUTE
138,412,E,GCT,A,MUTE
138,412,E,GCC,A,MUTE
138,412,E,GCA,A,MUTE
138,412,E,GCG,A,MUTE
138,412,E,ACT,T,MUTE
138,412,E,ACC,T,MUTE
138,412,E,ACA,T,MUTE
138,412,E,ACG,T,MUTE
140,418,G,GGA,G,WT
140,418,G,GCT,A,MUTE
140,418,G,GCC,A,MUTE
140,418,G,GCA,A,MUTE
140,418,G,GCG,A,MUTE
140,418,G,TGT,C,MUTE
140,418,G,TGC,C,MUTE
140,418,G,TCT,S,MUTE
140,418,G,TCC,S,MUTE
140,418,G,TCA,S,MUTE
140,418,G,TCG,S,MUTE
140,418,G,AGT,S,MUTE
140,418,G,AGC,S,MUTE
143,427,Y,TAC,Y,WT
143,427,Y,GCT,A,MUTE
143,427,Y,GCC,A,MUTE
143,427,Y,GCA,A,MUTE
143,427,Y,GCG,A,MUTE
143,427,Y,TGT,C,MUTE
143,427,Y,TGC,C,MUTE
143,427,Y,TCT,S,MUTE
143,427,Y,TCC,S,MUTE
143,427,Y,TCA,S,MUTE
143,427,Y,TCG,S,MUTE
143,427,Y,AGT,S,MUTE
143,427,Y,AGC,S,MUTE
143,427,Y,GGT,G,MUTE
143,427,Y,GGC,G,MUTE
143,427,Y,GGA,G,MUTE
143,427,Y,GGG,G,MUTE
143,427,Y,CAT,H,MUTE
143,427,Y,CAC,H,MUTE
143,427,Y,CGT,R,MUTE
143,427,Y,CGC,R,MUTE
143,427,Y,CGA,R,MUTE
143,427,Y,CGG,R,MUTE
143,427,Y,AGA,R,MUTE
143,427,Y,AGG,R,MUTE
145,433,P,CCC,P,WT
145,433,P,TCC,S,MUTE
145,433,P,TCA,S,MUTE
145,433,P,TCG,S,MUTE
145,433,P,AGT,S,MUTE
145,433,P,AGC,S,MUTE
145,433,P,TCT,S,MUTE
147,439,S,AGT,S,WT
147,439,S,GGT,G,MUTE
147,439,S,GGC,G,MUTE
147,439,S,GGA,G,MUTE
147,439,S,GGG,G,MUTE
148,442,Q,CAA,Q,WT
148,442,Q,CAG,Q,WT
148,442,Q,GAA,E,MUTE
148,442,Q,GAG,E,MUTE
148,442,Q,GGT,G,MUTE
148,442,Q,GGT,G,MUTE
148,442,Q,GGC,G,MUTE
148,442,Q,GGA,G,MUTE
148,442,Q,GGG,G,MUTE
148,442,Q,CAC,H,MUTE
148,442,Q,CAT,H,MUTE
148,442,Q,AAA,K,MUTE
148,442,Q,AAG,K,MUTE
148,442,Q,CGA,R,MUTE
148,442,Q,CGG,R,MUTE
148,442,Q,AGA,R,MUTE
148,442,Q,AGG,R,MUTE
151,451,V,GTA,V,WT
151,451,V,TTG,L,MUTE
151,451,V,TTA,L,MUTE
151,451,V,CTT,L,MUTE
151,451,V,CTC,L,MUTE
151,451,V,CTG,L,MUTE
151,451,V,CTA,L,MUTE
153,457,S,TCT,S,WT
153,457,S,TTT,F,MUTE
153,457,S,TTC,F,MUTE
153,457,S,TAT,Y,MUTE
153,457,S,TAC,Y,MUTE
155,463,N,AAT,N,WT
155,463,N,CAT,H,MUTE
155,463,N,CAC,H,MUTE
155,463,N,TCC,S,MUTE
155,463,N,TCA,S,MUTE
155,463,N,TCG,S,MUTE
155,463,N,AGT,S,MUTE
155,463,N,AGC,S,MUTE
155,463,N,TCT,S,MUTE
155,463,N,ACT,T,MUTE
155,463,N,ACC,T,MUTE
155,463,N,ACA,T,MUTE
155,463,N,ACG,T,MUTE
157,469,E,GAA,E,WT
157,469,E,CAA,Q,MUTE
157,469,E,CAG,Q,MUTE
230,688,S,AGC,S,WT
230,688,S,GGT,G,MUTE
230,688,S,GGC,G,MUTE
230,688,S,GGA,G,MUTE
230,688,S,GGG,G,MUTE
230,688,S,CGA,R,MUTE
230,688,S,CGG,R,MUTE
230,688,S,AGA,R,MUTE
230,688,S,AGG,R,MUTE
263,787,R,AGA,R,WT
263,787,R,AAA,K,MUTE
263,787,R,AAG,K,MUTE
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