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Commit a9fa4b58 authored by Yannis Duffourd's avatar Yannis Duffourd
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parent d066f640
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Showing with 191 additions and 222 deletions
data/integrase.tsv.csv
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#integrase #integrase
Position ,Position ,AA,Nucléotides,,CONCLUSION Position ,Position ,AA,Nucléotides,,CONCLUSION
AA,nucléotides,SAUVAGE,,AA FINAL, AA,nucléotides,SAUVAGE,,AA FINAL,
49,145,A,GCT,A,
49,145,A,GCC,A,WT
49,145,A,GCA,A,
49,145,A,GCG,A, 92,274,E,GAA,E,WT
49,145,A,GGT,G,MUTE
49,145,A,GGC,G,MUTE
49,145,A,GGG,G,MUTE
49,145,A,GGA,G,MUTE
92,274,E,GGG,G,MUTE
66,196,T,ACT,T, 92,274,E,GGT,G,MUTE
66,196,T,ACC,T, 92,274,E,GGC,G,MUTE
66,196,T,ACA,T,WT
66,196,T,ACG,T,
66,196,T,AAA,K,MUTE 97,289,T,ACA,T,WT
66,196,T,AAG,K,MUTE
66,196,T,ATT,I,MUTE
66,196,T,ATC,I,MUTE 97,289,T,GCA,A,MUTE
66,196,T,ATA,I,MUTE 97,289,T,GCT,A,MUTE
66,196,T,GCT,A,MUTE 97,289,T,GCG,A,MUTE
66,196,T,GCC,A,MUTE 97,289,T,GCC,A,MUTE
66,196,T,GCA,A,MUTE
66,196,T,GCG,A,MUTE
118,352,G,GGC,G,WT
74,220,L,TTG,L,
74,220,L,TTA,L,
74,220,L,CTT,L, 118,352,G,CGT,R,MUTE
74,220,L,CTC,L, 118,352,G,CGC,R,MUTE
74,220,L,CTG,L,WT 118,352,G,CGA,R,MUTE
74,220,L,CTA,L, 118,352,G,CGG,R,MUTE
74,220,L,ATT,I,MUTE 118,352,G,AGA,R,MUTE
74,220,L,ATC,I,MUTE 118,352,G,AGG,R,MUTE
74,220,L,ATA,I,MUTE
74,220,L,ATG,M,MUTE
121,361,F,TTC,F,WT
92,274,E,GAA,E,WT 121,361,F,TAT,Y,MUTE
92,274,E,GAG,E, 121,361,F,TAC,Y,MUTE
92,274,E,CAA,Q,MUTE
92,274,E,CAG,Q,MUTE 138,412,E,GAA,E,WT
92,274,E,GGA,G,MUTE
92,274,E,GGG,G,MUTE 138,412,E,AAA,K,MUTE
92,274,E,GGT,G,MUTE 138,412,E,AAG,K,MUTE
92,274,E,GGC,G,MUTE 138,412,E,GCT,A,MUTE
138,412,E,GCC,A,MUTE
97,289,T,ACT,T, 138,412,E,GCA,A,MUTE
97,289,T,ACA,T,WT 138,412,E,GCG,A,MUTE
97,289,T,ACG,T, 138,412,E,ACT,T,MUTE
97,289,T,ACC,T, 138,412,E,ACC,T,MUTE
97,289,T,GCA,A,MUTE 138,412,E,ACA,T,MUTE
97,289,T,GCT,A,MUTE 138,412,E,ACG,T,MUTE
97,289,T,GCG,A,MUTE
97,289,T,GCC,A,MUTE
118,352,G,GGT,G, 140,418,G,GGA,G,WT
118,352,G,GGC,G,WT
118,352,G,GGA,G, 140,418,G,GCT,A,MUTE
118,352,G,GGG,G, 140,418,G,GCC,A,MUTE
118,352,G,CGT,R,MUTE 140,418,G,GCA,A,MUTE
118,352,G,CGC,R,MUTE 140,418,G,GCG,A,MUTE
118,352,G,CGA,R,MUTE 140,418,G,TGT,C,MUTE
118,352,G,CGG,R,MUTE 140,418,G,TGC,C,MUTE
118,352,G,AGA,R,MUTE 140,418,G,TCT,S,MUTE
118,352,G,AGG,R,MUTE 140,418,G,TCC,S,MUTE
140,418,G,TCA,S,MUTE
121,361,F,TTT,F, 140,418,G,TCG,S,MUTE
121,361,F,TTC,F,WT 140,418,G,AGT,S,MUTE
121,361,F,TAT,Y,MUTE 140,418,G,AGC,S,MUTE
121,361,F,TAC,Y,MUTE
138,412,E,GAA,E,WT 143,427,Y,TAC,Y,WT
138,412,E,GAG,E, 143,427,Y,GCT,A,MUTE
138,412,E,AAA,K,MUTE 143,427,Y,GCC,A,MUTE
138,412,E,AAG,K,MUTE 143,427,Y,GCA,A,MUTE
138,412,E,GCT,A,MUTE 143,427,Y,GCG,A,MUTE
138,412,E,GCC,A,MUTE 143,427,Y,TGT,C,MUTE
138,412,E,GCA,A,MUTE 143,427,Y,TGC,C,MUTE
138,412,E,GCG,A,MUTE 143,427,Y,TCT,S,MUTE
138,412,E,ACT,T,MUTE 143,427,Y,TCC,S,MUTE
138,412,E,ACC,T,MUTE 143,427,Y,TCA,S,MUTE
138,412,E,ACA,T,MUTE 143,427,Y,TCG,S,MUTE
138,412,E,ACG,T,MUTE 143,427,Y,AGT,S,MUTE
143,427,Y,AGC,S,MUTE
140,418,G,GGT,G, 143,427,Y,GGT,G,MUTE
140,418,G,GGC,G, 143,427,Y,GGC,G,MUTE
140,418,G,GGA,G,WT 143,427,Y,GGA,G,MUTE
140,418,G,GGG,G, 143,427,Y,GGG,G,MUTE
140,418,G,GCT,A,MUTE 143,427,Y,CAT,H,MUTE
140,418,G,GCC,A,MUTE 143,427,Y,CAC,H,MUTE
140,418,G,GCA,A,MUTE 143,427,Y,CGT,R,MUTE
140,418,G,GCG,A,MUTE 143,427,Y,CGC,R,MUTE
140,418,G,TGT,C,MUTE 143,427,Y,CGA,R,MUTE
140,418,G,TGC,C,MUTE 143,427,Y,CGG,R,MUTE
140,418,G,TCT,S,MUTE 143,427,Y,AGA,R,MUTE
140,418,G,TCC,S,MUTE 143,427,Y,AGG,R,MUTE
140,418,G,TCA,S,MUTE
140,418,G,TCG,S,MUTE
140,418,G,AGT,S,MUTE 145,433,P,CCC,P,WT
140,418,G,AGC,S,MUTE
143,427,Y,TAT,Y, 145,433,P,TCC,S,MUTE
143,427,Y,TAC,Y,WT 145,433,P,TCA,S,MUTE
143,427,Y,GCT,A,MUTE 145,433,P,TCG,S,MUTE
143,427,Y,GCC,A,MUTE 145,433,P,AGT,S,MUTE
143,427,Y,GCA,A,MUTE 145,433,P,AGC,S,MUTE
143,427,Y,GCG,A,MUTE 145,433,P,TCT,S,MUTE
143,427,Y,TGT,C,MUTE
143,427,Y,TGC,C,MUTE
143,427,Y,TCT,S,MUTE
143,427,Y,TCC,S,MUTE
143,427,Y,TCA,S,MUTE 147,439,S,AGT,S,WT
143,427,Y,TCG,S,MUTE
143,427,Y,AGT,S,MUTE 147,439,S,GGT,G,MUTE
143,427,Y,AGC,S,MUTE 147,439,S,GGC,G,MUTE
143,427,Y,GGT,G,MUTE 147,439,S,GGA,G,MUTE
143,427,Y,GGC,G,MUTE 147,439,S,GGG,G,MUTE
143,427,Y,GGA,G,MUTE 148,442,Q,CAA,Q,WT
143,427,Y,GGG,G,MUTE 148,442,Q,CAG,Q,WT
143,427,Y,CAT,H,MUTE 148,442,Q,GAA,E,MUTE
143,427,Y,CAC,H,MUTE 148,442,Q,GAG,E,MUTE
143,427,Y,CGT,R,MUTE 148,442,Q,GGT,G,MUTE
143,427,Y,CGC,R,MUTE 148,442,Q,GGT,G,MUTE
143,427,Y,CGA,R,MUTE 148,442,Q,GGC,G,MUTE
143,427,Y,CGG,R,MUTE 148,442,Q,GGA,G,MUTE
143,427,Y,AGA,R,MUTE 148,442,Q,GGG,G,MUTE
143,427,Y,AGG,R,MUTE 148,442,Q,CAC,H,MUTE
148,442,Q,CAT,H,MUTE
145,433,P,CCT,P, 148,442,Q,AAA,K,MUTE
145,433,P,CCC,P,WT 148,442,Q,AAG,K,MUTE
145,433,P,CCA,P, 148,442,Q,CGA,R,MUTE
145,433,P,CCG,P, 148,442,Q,CGG,R,MUTE
145,433,P,TCC,S,MUTE 148,442,Q,AGA,R,MUTE
145,433,P,TCA,S,MUTE 148,442,Q,AGG,R,MUTE
145,433,P,TCG,S,MUTE
145,433,P,AGT,S,MUTE
145,433,P,AGC,S,MUTE 151,451,V,GTA,V,WT
145,433,P,TCT,S,MUTE
147,439,S,TCT,S, 151,451,V,TTG,L,MUTE
147,439,S,TCC,S, 151,451,V,TTA,L,MUTE
147,439,S,TCA,S, 151,451,V,CTT,L,MUTE
147,439,S,TCG,S, 151,451,V,CTC,L,MUTE
147,439,S,AGT,S,WT 151,451,V,CTG,L,MUTE
147,439,S,AGC,S, 151,451,V,CTA,L,MUTE
147,439,S,GGT,G,MUTE 153,457,S,TCT,S,WT
147,439,S,GGC,G,MUTE
147,439,S,GGA,G,MUTE
147,439,S,GGG,G,MUTE
148,442,Q,CAA,Q,WT
148,442,Q,CAG,Q,WT
148,442,Q,GAA,E,MUTE 153,457,S,TTT,F,MUTE
148,442,Q,GAG,E,MUTE 153,457,S,TTC,F,MUTE
148,442,Q,GGT,G,MUTE 153,457,S,TAT,Y,MUTE
148,442,Q,GGT,G,MUTE 153,457,S,TAC,Y,MUTE
148,442,Q,GGC,G,MUTE 155,463,N,AAT,N,WT
148,442,Q,GGA,G,MUTE
148,442,Q,GGG,G,MUTE 155,463,N,CAT,H,MUTE
148,442,Q,CAC,H,MUTE 155,463,N,CAC,H,MUTE
148,442,Q,CAT,H,MUTE 155,463,N,TCC,S,MUTE
148,442,Q,AAA,K,MUTE 155,463,N,TCA,S,MUTE
148,442,Q,AAG,K,MUTE 155,463,N,TCG,S,MUTE
148,442,Q,CGA,R,MUTE 155,463,N,AGT,S,MUTE
148,442,Q,CGG,R,MUTE 155,463,N,AGC,S,MUTE
148,442,Q,AGA,R,MUTE 155,463,N,TCT,S,MUTE
148,442,Q,AGG,R,MUTE 155,463,N,ACT,T,MUTE
151,451,V,GTT,V, 155,463,N,ACC,T,MUTE
151,451,V,GTC,V, 155,463,N,ACA,T,MUTE
151,451,V,GTA,V,WT 155,463,N,ACG,T,MUTE
151,451,V,GTG,V, 157,469,E,GAA,E,WT
151,451,V,TTG,L,MUTE
151,451,V,TTA,L,MUTE 157,469,E,CAA,Q,MUTE
151,451,V,CTT,L,MUTE 157,469,E,CAG,Q,MUTE
151,451,V,CTC,L,MUTE
151,451,V,CTG,L,MUTE
151,451,V,CTA,L,MUTE
153,457,S,TCT,S,WT
153,457,S,TCC,S,
153,457,S,TCA,S, 230,688,S,AGC,S,WT
153,457,S,TCG,S, 230,688,S,GGT,G,MUTE
153,457,S,AGT,S, 230,688,S,GGC,G,MUTE
153,457,S,AGC,S, 230,688,S,GGA,G,MUTE
153,457,S,TTT,F,MUTE 230,688,S,GGG,G,MUTE
153,457,S,TTC,F,MUTE 230,688,S,CGA,R,MUTE
153,457,S,TAT,Y,MUTE 230,688,S,CGG,R,MUTE
153,457,S,TAC,Y,MUTE 230,688,S,AGA,R,MUTE
155,463,N,AAT,N,WT 230,688,S,AGG,R,MUTE
155,463,N,AAC,N,
155,463,N,CAT,H,MUTE 263,787,R,AGA,R,WT
155,463,N,CAC,H,MUTE 263,787,R,AAA,K,MUTE
155,463,N,TCC,S,MUTE 263,787,R,AAG,K,MUTE
155,463,N,TCA,S,MUTE
155,463,N,TCG,S,MUTE
155,463,N,AGT,S,MUTE
155,463,N,AGC,S,MUTE
155,463,N,TCT,S,MUTE
155,463,N,ACT,T,MUTE
155,463,N,ACC,T,MUTE
155,463,N,ACA,T,MUTE
155,463,N,ACG,T,MUTE
157,469,E,GAA,E,WT
157,469,E,GAG,E,
157,469,E,CAA,Q,MUTE
157,469,E,CAG,Q,MUTE
230,688,S,TCT,S,
230,688,S,TCC,S,
230,688,S,TCA,S,
230,688,S,TCG,S,
230,688,S,AGT,S,
230,688,S,AGC,S,WT
230,688,S,GGT,G,MUTE
230,688,S,GGC,G,MUTE
230,688,S,GGA,G,MUTE
230,688,S,GGG,G,MUTE
230,688,S,CGA,R,MUTE
230,688,S,CGG,R,MUTE
230,688,S,AGA,R,MUTE
230,688,S,AGG,R,MUTE
263,787,R,AGG,R,
263,787,R,AGA,R,WT
263,787,R,AAA,K,MUTE
263,787,R,AAG,K,MUTE
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