Commit 09497ec1 authored by Theo Serralta's avatar Theo Serralta

Add requirements on header

parent f3fb9d8e
......@@ -6,7 +6,7 @@
## Description : This script find CNV and SV events
## Usage : python3 cnv_sv_caller_gpu.py -b <input/bamfile> -c <num_chr (int) | "All"> -w 100 -s 10 -z 1.5 -l 200 -o <output/vcf/cnv> -p <output/tsv/pairs> -m <output/tsv/splits> -e <log/file>
## Output : An events file for CNV, paired-reads and split-reads
## Requirements : python 3.0+
## Requirements : python 3.0+, pysam, pandas, getopt, numpy, pycuda, multiprocessing, subprocess, collections
## Author : Theo.Serralta@u-bourgogne.fr | theo.serralta@gmail.com
## Creation Date : 20230928
......@@ -32,8 +32,6 @@ from collections import defaultdict
from datetime import datetime
# Options
def parse_arguments():
"""
Parse command-line arguments.
......
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