Commit ffa4d431 authored by Valentin Vautrot's avatar Valentin Vautrot

Cleaning up .def file script and useless comments

parent 7d92b402
...@@ -3,7 +3,7 @@ From: centos:8 ...@@ -3,7 +3,7 @@ From: centos:8
%help %help
This is a singularity container packing picard tools v3.0.0 and java 17. An R installation (4.3.3) is also provided as it is required by some picard tools. This is a singularity container packing picard tools v3.0.0 and java 17. An R installation (4.3.3) is also provided as it is required by some picard tools.
Author : yannis.duffourd@u-bourgogne.fr, valentin.vautrot@u-bourgogne.fr Authors : yannis.duffourd@u-bourgogne.fr, valentin.vautrot@u-bourgogne.fr
This singularity recipe is open source and free. Please redistribute it as well. This singularity recipe is open source and free. Please redistribute it as well.
No warranty is provided. No warranty is provided.
...@@ -16,10 +16,6 @@ dnf update -y --exclude=filesystem ...@@ -16,10 +16,6 @@ dnf update -y --exclude=filesystem
dnf install -y epel-release wget dnf install -y epel-release wget
dnf --enablerepo=powertools install -y openblas-devel dnf --enablerepo=powertools install -y openblas-devel
# # install R with (old) java included
# dnf install -y R-4.3.3-1.el8.x86_64
# dnf remove -y java-1.8.0-openjdk java-1.8.0-openjdk-devel java-1.8.0-openjdk-headless
# # install R # # install R
dnf install -y R-core-4.3.3-1.el8.x86_64 dnf install -y R-core-4.3.3-1.el8.x86_64
...@@ -45,7 +41,7 @@ Java version 17.0.1 ...@@ -45,7 +41,7 @@ Java version 17.0.1
export PATH=$PATH:$JAVA_HOME/bin export PATH=$PATH:$JAVA_HOME/bin
%runscript %runscript
echo "java version : " echo "## java version : "
java -version java -version
echo "R version : " echo "## R version : "
R --version R --version
\ No newline at end of file
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment