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Commit d471118e authored by Yannis Duffourd's avatar Yannis Duffourd
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Adding centos packages

parent 0e816f1d
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dada2.def
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......@@ -20,7 +20,7 @@ yum groupinstall -y development
yum --enablerepo=powertools install -y libyaml-devel libffi-devel
yum install -y wget which time zlib-devel munge-libs jemalloc openssl-devel sqlite-devel bzip2-devel xz-libs libcurl-devel libtiff-devel libjpeg-devel libxml2-devel libffi-devel.x86_64 libyaml-devel dos2unix gcc expat-devel llvm-devel llvm-toolset gcc-gfortran readline-devel libX11-devel libXt-devel xorg-x11-server-utils xorg-x11-server-Xorg xorg-x11-xauth pcre pcre-devel
yum install -y wget which time zlib-devel munge-libs jemalloc openssl-devel sqlite-devel bzip2-devel xz-libs libcurl-devel libtiff-devel libjpeg-devel libxml2-devel libffi-devel.x86_64 libyaml-devel dos2unix gcc expat-devel llvm-devel llvm-toolset gcc-gfortran readline-devel libX11-devel libXt-devel xorg-x11-server-utils xorg-x11-server-Xorg xorg-x11-xauth pcre pcre-devel libpng-devel.x86_64
dnf -y install epel-release
......@@ -42,7 +42,6 @@ make install
/opt/bin/Rscript -e 'install.packages("https://cran.r-project.org/package=BiocManager&version=1.30.18", repos=NULL, type="source" )'
/opt/bin/Rscript -e 'install.packages("https://cran.r-project.org/package=latticeExtra&version=0.6-29", repos=NULL, type="source" )'
/opt/bin/Rscript -e 'BiocManager::install("dada2")'
......
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