Add version control for python pip packages

python_3.9.def

@@ -41,15 +41,15 @@ mv -v /data/gadpipeline/common/GeneralTools.py /data/gadpipeline/common/LabkeyTo
 
 # install python pip packages
 pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ labkey==1.4.0
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ numpy
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ matplotlib
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ pandas
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ numpy==2.0.2
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ matplotlib==3.9.4
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ pandas==2.2.3
 # pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ plotly
 # is causing an error due to plotly.plotly module being deprecated in python3.9. chart-studio package (with the chart_studio.plotly module) is to be used in replacement.
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ chart-studio
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ scipy
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ pyvcf
-pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ simplejson
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ chart-studio==1.1.0
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ scipy==1.13.1
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ pyvcf==0.6.8
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ simplejson==3.19.3
 
 #cleaning
 rm -rf /data/