Skip to content
Projects
Groups
Snippets
Help
This project
Loading...
Sign in / Register
Toggle navigation
S
STR
Project
Project
Details
Activity
Cycle Analytics
Repository
Repository
Files
Commits
Branches
Tags
Contributors
Graph
Compare
Charts
Issues
0
Issues
0
List
Board
Labels
Milestones
Merge Requests
0
Merge Requests
0
CI / CD
CI / CD
Pipelines
Jobs
Schedules
Charts
Wiki
Wiki
Snippets
Snippets
Members
Members
Collapse sidebar
Close sidebar
Activity
Graph
Charts
Create a new issue
Jobs
Commits
Issue Boards
Open sidebar
Anne-Sophie Denommé-Pichon
STR
Commits
4c33f449
Commit
4c33f449
authored
Feb 16, 2020
by
Anne-Sophie Denommé-Pichon
Browse files
Options
Browse Files
Download
Email Patches
Plain Diff
Create script to launch ehdn outlier analysis on SGE
parent
3df41650
Hide whitespace changes
Inline
Side-by-side
Showing
1 changed file
with
23 additions
and
0 deletions
+23
-0
launch_pipeline_ehdn.sh
launch_pipeline_ehdn.sh
+23
-0
No files found.
launch_pipeline_ehdn.sh
0 → 100755
View file @
4c33f449
#! /bin/sh
### ASDP PIPELINE ###
## Version: 0.0.1
## Licence: FIXME
## Description : script to launch the pipeline for STR detection with EHDN outlier
## Usage :
## Output : FIXME
## Requirements : FIXME
## Author : anne-sophie.denomme-pichon@u-bourgogne.fr
## Creation Date : 20200215
## last revision date : 20200215
## Known bugs : None
LAUNCHER
=
"
$(
readlink
-f
"
$(
dirname
"
$0
"
)
/launch_ehdn_outlier.sh"
)
"
cd
"/work/gad/shared/analyse/STR/pipeline"
printf
"%s
\n
"
dijen
*
|
/work/gad/shared/bin/parallel/parallel-20150522-1.el7.cern/bin/parallel
\
--jobs
30
\
--line-buffer
\
"
$LAUNCHER
"
Write
Preview
Markdown
is supported
0%
Try again
or
attach a new file
Attach a file
Cancel
You are about to add
0
people
to the discussion. Proceed with caution.
Finish editing this message first!
Cancel
Please
register
or
sign in
to comment