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S
STR
Commit 2740da81 authored by Anne-Sophie Denommé-Pichon's avatar Anne-Sophie Denommé-Pichon
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README.md
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# STR detection pipeline # STR detection pipeline
ASDP PIPELINE - ASDP PIPELINE
Author: anne-sophie.denomme-pichon@u-bourgogne.fr - Author: anne-sophie.denomme-pichon@u-bourgogne.fr
Version: 0.0.1 - Version: 0.0.1
Licence: FIXME - Licence: FIXME
Description: How to launch scripts to get STR genotype from genomes on all the locus tested - Description: How to launch scripts to get STR genotype from genomes on all the locus tested
1. Create genomes.list 1. Create genomes.list
2. Specify output file in launch_pipeline.sh 2. Specify output file in launch_pipeline.sh
Warning, don't overwrite existing files Warning, don't overwrite existing files
3. Launch launch_pipeline.sh 3. Launch launch_pipeline.sh
```bash `nohup ./launch_pipeline.sh &`
nohup ./launch_pipeline.sh &
```
Dependencies : Dependencies :
- genomes.list - genomes.list
- pipeline.sh - pipeline.sh
......
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