Added python 3.9 packages installation verified up until the end of full_wes.sh…

Added python 3.9 packages installation verified up until the end of full_wes.sh as in version 2.10.0 of gadpipeline

Added python 3.9 packages installation verified up until the end of full_wes.sh…
29b6c61d · Valentin Vautrot · 1c716329 · 29b6c61d
Commit 29b6c61d authored Sep 18, 2023 by Valentin Vautrot
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Showing with 7 additions and 4 deletions

python_3.9.def python_3.9.def +7 -4

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--- a/python_3.9.def
+++ b/python_3.9.def
@@ -42,6 +42,9 @@ mv /data/CnvTools.py /usr/lib/python3.9/site-packages/
 rmdir /data/
 # install python pip packages
-pip3.9 install -t /usr/lib/python3.9/site-packages/ labkey
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ labkey
-pip3.9 install -t /usr/lib/python3.9/site-packages/ numpy
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ numpy
-pip3.9 install -t /usr/lib/python3.9/site-packages/ matplotlib
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ matplotlib
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+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ pandas
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ plotly
+pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ scipy
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