Skip to content

S
singularity
Commit 29b6c61d authored by Valentin Vautrot's avatar Valentin Vautrot
Browse files
Options

Added python 3.9 packages installation verified up until the end of full_wes.sh…

Added python 3.9 packages installation verified up until the end of full_wes.sh as in version 2.10.0 of gadpipeline
parent 1c716329
Show whitespace changes
Inline Side-by-side
Showing with 7 additions and 4 deletions
python_3.9.def
View file @ 29b6c61d
......@@ -42,6 +42,9 @@ mv /data/CnvTools.py /usr/lib/python3.9/site-packages/
rmdir /data/
# install python pip packages
pip3.9 install -t /usr/lib/python3.9/site-packages/ labkey
pip3.9 install -t /usr/lib/python3.9/site-packages/ numpy
pip3.9 install -t /usr/lib/python3.9/site-packages/ matplotlib
\ No newline at end of file
pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ labkey
pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ numpy
pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ matplotlib
pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ pandas
pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ plotly
pip3.9 install --upgrade -t /usr/lib/python3.9/site-packages/ scipy
\ No newline at end of file
Markdown is supported
0% or
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment